OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 5va8 [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Slab plane

Direction	Proportion
From front	%
From back	%
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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

CRYSTAL STRUCTURE OF SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR FROM BURKHOLDERIA PHYMATUM IN COMPLEX WITH NADP

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
5va8			Not in PubMed	X-RAY DIFFRACTION/1.6	MPO:3[N-MORPHOLINO]PROPANE SULFONIC ACID NAP:NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE TCE:3,3___sq___,3___sq______sq___-PHOSPHANETRIYLTRIPROPANOIC ACID

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
333648	A:-1-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
333647	A:1-259	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Paraburkholderia phymatum [TaxId: 391038]
333646	B:-1-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
333645	B:1-259	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Paraburkholderia phymatum [TaxId: 391038]
333655	C:-1-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
333654	C:1-259	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Paraburkholderia phymatum [TaxId: 391038]
333674	D:-1-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
333673	D:1-259	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Paraburkholderia phymatum [TaxId: 391038]

CATH

CATH ID	Node	Class	Architecture	Topology	Homology
5va8A00	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
5va8B00	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
5va8C00	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
5va8D00	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain