PDB ID : 5z75 [A2]

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ARa IRb





 a AR:All Residues
 b IR:Interface Residues

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Secondary Structure


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Slab plane

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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
Title
ARTIFICIAL L-THREONINE 3-DEHYDROGENASE DESIGNED BY ANCESTRAL SEQUENCE RECONSTRUCTION.

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
5z75
29787243 X-RAY DIFFRACTION/2.1 2PE:NONAETHYLENE GLYCOL
NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE
PO4:PHOSPHATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A2] [A2] [A2]

Interfaces
Interface ID Chain Inaterface
Class		 Interface Type Contact Type
5z75_AB A
B		 HN
HN		 i1_CR(H21,N7)_HH(P1,S1)_HN(L1,S4)
i1_CR(H21,N7)_HH(P1,S1)_HN(L1,S4) 		c5_RP(HH48,NN4,HN7,NH7)_HH(A5,S2)_HN(L1,S5)
c5_RP(HH48,NN4,HN7,NH7)_HH(A5,S2)_HN(L1,S5)

Interface Class
Interface ID Interface 1 Interface 2
Domain Number of contact residues Binding site Class Percentages of Secondary structures(%) Domain Number of contact residues Binding site Class Percentages of Secondary structures(%)
H E N H E N
5z75_AB A 26 HN 65.4 100 34.6 B 25 HN 72 0 28

Interface Type: Information for each interface
Interface ID chain Number of contact residues Number of elements Number of contacts between Secondary structure elements
HH EE HE HN EN
Hn En Nn H E N R L P A S P A S Ph Ah Ih P A S L S L S
5z75_AB A 17 26 9 3 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 1 1 0 0
5z75_AB B 18 0 7 3 0 1 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0

Contact Type: Information of contacts between interfaces
Interface ID Number of residue pairs between SS elements Number of contacts between Secondary structure elements
H-H E-E N-N H-E H-N N-E E-H N-H E-N H-H E-E H-E H-N E-N
P A S Ih P A S IPh IAh P A S Ih L S Ih L S Ih
5z75_AB 41 0 6 0 7 0 0 4 0 0 4 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
x78229_Not ClassifiedNot Classified 782Not Classified 782Not Classified 782Not Classified 782Not Classified 78229

CATH
CATH ID Node Class Architecture Topology Homology
5z75A003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5z75B003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5z75C003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5z75D003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain